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1.
J Phys Chem C Nanomater Interfaces ; 127(31): 15435-15442, 2023 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-37706058

RESUMO

We present an abinitio study of the quasi-2D layered perovskite Sr3Hf2O7 compound, performed within the framework of the density functional theory and lattice dynamics analysis. At high temperatures, this compound takes a I4/mmm centrosymmetric structure (S.G. n. 139); as the temperature is lowered, the symmetry is broken into other intermediate polymorphs before reaching the ground-state structure, which is the Cmc21 ferroelectric phase (S.G. n. 36). One of these intermediate polymorphs is the Ccce structural phase (S.G. n. 68). Additionally, we have probed the C2/c system (S.G n. 15), which was obtained by following the atomic displacements corresponding to the eigenvectors of the imaginary frequency mode localized at the Γ-point of the Ccce phase. By observing the enthalpies at low pressures, we found that the Cmc21 phase is thermodynamically the most stable. Our results show that the I4/mmm and C2/c phases never stabilize in the 0-20 GPa range of pressure values. On the other hand, the Ccce phase becomes energetically more stable at around 17 GPa, surpassing the Cmc21 structure. By considering the effect of entropy and the constant-volume free energies, we observe that the Cmc21 polymorph is energetically the most stable phase at low temperature; however, at 350 K, the Ccce system becomes the most stable. By probing the volume-dependent free energies at 19 GPa, we see that Ccce is always the most stable phase between the two structures and also throughout the studied temperature range. When analyzing the phonon dispersion frequencies, we conclude that the Ccce system becomes dynamically stable only around 19-20 GPa and that the Cmc21 phase is metastable up to 30 GPa.

2.
Int J Cardiol Cardiovasc Risk Prev ; 18: 200197, 2023 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-37521244

RESUMO

Background: In patients with established heart failure (HF) low total cholesterol levels associate with worse prognosis. Evidence concerning the impact of Low-density lipoprotein cholesterol (LDL-c) in HF is scarce. We aimed to evaluate the prognostic impact of LDL-c in patients with HF, both with and without diabetes mellitus (DM). Methods: We retrospectively analyzed outpatients with chronic HF with systolic dysfunction followed in our HF clinic from January/2012 to May/2018. LDL-c was calculated using the Friedewald's formula. Patients without a complete lipid profile were excluded. The endpoint under analysis was all-cause mortality. Patients were followed until January/2021. A Cox-regression analysis was used to study the prognostic impact of LDL-c. The LDL-c cut-off used was 100 mg/dL (mean value). Analysis was stratified according to the coexistence of DM. Multivariate models were built adjusting for age, sex, coronary artery disease, atherosclerotic non-coronary artery disease, arterial hypertension, smoking status, statin use, severity of systolic dysfunction, creatinine clearance and evidence-based therapy. Results: We studied 522 chronic HF patients, mean age was 70 years, 66.5% males. Severe systolic dysfunction was present in 42.7%, 30.5% had coronary heart disease, 60.5% had arterial hypertension, 41.6% had DM. A total of 92.0% were treated with beta blocker, 87.5% with an ACEi/ARB and 29.1% with a MRA. During a median follow-up of 53 (interquartile range 33-73) months, 235 (45%) patients died. Patients with LDL-c ≤100 mg/dL presented increased multivariate-adjusted risk of all-cause mortality: HR = 1.58 (95% CI: 1.08-2.30), p = 0.02. When patients were stratified according to DM, LDL-c ≤100 mg/dL was independently associated with increased death risk - HR = 1.55 (95% CI:1.05-2.30), p = 0.03 in patients without DM; in patients with DM no association was detected - multivariate-adjusted HR = 1.18 (95% CI: 0.77-1.80), p = 0.44. Conclusion: Non-DM HF patients with LDL-c>100 mg/dL have a 35% reduction in the mortality risk when compared with those with lower values. The "cholesterol paradox" in HF also applies to LDL-c in non-DM patients.

3.
Sci Rep ; 13(1): 8193, 2023 May 20.
Artigo em Inglês | MEDLINE | ID: mdl-37210425

RESUMO

Thermomagnetic properties, and its effects on Fisher information entropy with Schioberg plus Manning-Rosen potential are studied using NUFA and SUSYQM methods in the presence of the Greene-Aldrich approximation scheme to the centrifugal term. The wave function obtained was used to study Fisher information both in position and momentum spaces for different quantum states by the gamma function and digamma polynomials. The energy equation obtained in a closed form was used to deduce numerical energy spectra, partition function, and other thermomagnetic properties. The results show that with an application of AB and magnetic fields, the numerical energy eigenvalues for different magnetic quantum spins decrease as the quantum state increases and completely removes the degeneracy of the energy spectra. Also, the numerical computation of Fisher information satisfies Fisher information inequality products, indicating that the particles are more localized in the presence of external fields than in their absence, and the trend shows complete localization of quantum mechanical particles in all quantum states. Our potential reduces to Schioberg and Manning-Rosen potentials as special cases. Our potential reduces to Schioberg and Manning-Rosen potentials as special cases. The energy equations obtained from the NUFA and SUSYQM were the same, demonstrating a high level of mathematical precision.

4.
Fungal Syst Evol ; 12: 91-110, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-38533477

RESUMO

Four new species of the genus Niveomyces are described from Thailand. They were found as mycoparasites on: Ophiocordyceps infecting flies (Diptera) for Niveomyces albus; ants (Hymenoptera) for N. formicidarum; and leafhoppers (Hemiptera) for N. hirsutellae and N. multisynnematus. A new genus, Pseudoniveomyces with two species: Pseudoniveo. blattae (type species), parasitic on Ophiocordyceps infecting cockroaches, and Pseudoniveo. arachnovorum, found on a spider egg sac, are also described. These fungi share a common feature which is a sporothrix-like asexual morph. Based on our molecular data, Sporothrix insectorum is shown to be affiliated to the genus Niveomyces, and thus a new combination N. insectorum comb. nov. is proposed. Niveomyces coronatus, N. formicidarum and N. insectorum formed the N. coronatus species complex found on ant-pathogenic Ophiocordyceps from different continents. Pseudoniveomyces species are distinguished from Niveomyces spp. based on the presence of fusoid macroconidia in culture and a red pigment diffused in the medium, resembling to Gibellula and Hevansia. The molecular phylogenetic analyses also confirmed its generic status. The host/substrates associated with the genera within Cordycipitaceae were mapped onto the phylogeny to demonstrate that mycoparasitism also evolved independently multiple times in this family. Citation: Kobmoo N, Tasanathai K, Araújo JPM, Noisripoom W, Thanakitpipattana D, Mongkolsamrit S, Himaman W, Houbraken J, Luangsa-ard JJ (2023). New mycoparasitic species in the genera Niveomyces and Pseudoniveomyces gen. nov. (Hypocreales: Cordycipitaceae), with sporothrix-like asexual morphs, from Thailand. Fungal Systematics and Evolution 12: 91-110. doi: 10.3114/fuse.2023.12.07.

5.
Heliyon ; 8(9): e10343, 2022 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-36097478

RESUMO

In this work, we determined an approximate eigen solutions of Modified multi-parameter exponential potential using supersymmetric quantum mechanics approach (SUSY) with improved Greene-Aldrich approximation to the centrifugal term. The energy equation and its corresponding normalised radial wave function were fully obtained. The proposed potential reduces to other useful potentials like Rosen-Morse, Hellmann, Yukawa and Coulomb potential as special cases. The thermodynamic properties like the vibrational mean energy ( U ß , V ), Vibrational heat capacity ( C ß , V ), vibrational entropy ( S ß , V ) and vibrational free energy ( F ß , V ) of the interacting potential were studied via partition function ( Z ß , V ) obtained from the resulting energy equation. This study was applied to three diatomic molecules: Chromium hydride (CrH), Titanium Hydride (TiH) and Thiocynate (ScN). To ascertain the high degree of our analytical mathematical accuracy, we compared the results of special cases with an existing results. These were found to be in excellent agreement with the existing results.

6.
Persoonia ; 49: 171-194, 2022 Dec 20.
Artigo em Inglês | MEDLINE | ID: mdl-38234384

RESUMO

During surveys in central Florida of the zombie-ant fungus Ophiocordyceps camponoti-floridani, which manipulates the behavior of the carpenter ant Camponotus floridanus, two distinct fungal morphotypes were discovered associated with and purportedly parasitic on O. camponoti-floridani. Based on a combination of unique morphology, ecology and phylogenetic placement, we discovered that these morphotypes comprise two novel lineages of fungi. Here, we propose two new genera, Niveomyces and Torrubiellomyces, each including a single species within the families Cordycipitaceae and Ophiocordycipitaceae, respectively. We generated de novo draft genomes for both new species and performed morphological and multi-loci phylogenetic analyses. The macromorphology and incidence of both new species, Niveomyces coronatus and Torrubiellomyces zombiae, suggest that these fungi are mycoparasites since their growth is observed exclusively on O. camponoti-floridani mycelium, stalks and ascomata, causing evident degradation of their fungal hosts. This work provides a starting point for more studies into fungal interactions between mycopathogens and entomopathogens, which have the potential to contribute towards efforts to battle the global rise of plant and animal mycoses. Citation: Araújo JPM, Lebert BM, Vermeulen S, et al. 2022. Masters of the manipulator: two new hypocrealean general, Niveomyces (Cordycipitaceae) and Torrubiellomyces (Ophiocordycipitaceae), parasitic on the zombie ant fungus Ophiocordyceps camponoti-floridani. Persoonia 49: 171-194. https://doi.org/10.3767/persoonia.2022.49.05.

7.
Stud Mycol ; 98: 100116, 2021 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-34466168

RESUMO

Recent publications have argued that there are potentially serious consequences for researchers in recognising distinct genera in the terminal fusarioid clade of the family Nectriaceae. Thus, an alternate hypothesis, namely a very broad concept of the genus Fusarium was proposed. In doing so, however, a significant body of data that supports distinct genera in Nectriaceae based on morphology, biology, and phylogeny is disregarded. A DNA phylogeny based on 19 orthologous protein-coding genes was presented to support a very broad concept of Fusarium at the F1 node in Nectriaceae. Here, we demonstrate that re-analyses of this dataset show that all 19 genes support the F3 node that represents Fusarium sensu stricto as defined by F. sambucinum (sexual morph synonym Gibberella pulicaris). The backbone of the phylogeny is resolved by the concatenated alignment, but only six of the 19 genes fully support the F1 node, representing the broad circumscription of Fusarium. Furthermore, a re-analysis of the concatenated dataset revealed alternate topologies in different phylogenetic algorithms, highlighting the deep divergence and unresolved placement of various Nectriaceae lineages proposed as members of Fusarium. Species of Fusarium s. str. are characterised by Gibberella sexual morphs, asexual morphs with thin- or thick-walled macroconidia that have variously shaped apical and basal cells, and trichothecene mycotoxin production, which separates them from other fusarioid genera. Here we show that the Wollenweber concept of Fusarium presently accounts for 20 segregate genera with clear-cut synapomorphic traits, and that fusarioid macroconidia represent a character that has been gained or lost multiple times throughout Nectriaceae. Thus, the very broad circumscription of Fusarium is blurry and without apparent synapomorphies, and does not include all genera with fusarium-like macroconidia, which are spread throughout Nectriaceae (e.g., Cosmosporella, Macroconia, Microcera). In this study four new genera are introduced, along with 18 new species and 16 new combinations. These names convey information about relationships, morphology, and ecological preference that would otherwise be lost in a broader definition of Fusarium. To assist users to correctly identify fusarioid genera and species, we introduce a new online identification database, Fusarioid-ID, accessible at www.fusarium.org. The database comprises partial sequences from multiple genes commonly used to identify fusarioid taxa (act1, CaM, his3, rpb1, rpb2, tef1, tub2, ITS, and LSU). In this paper, we also present a nomenclator of names that have been introduced in Fusarium up to January 2021 as well as their current status, types, and diagnostic DNA barcode data. In this study, researchers from 46 countries, representing taxonomists, plant pathologists, medical mycologists, quarantine officials, regulatory agencies, and students, strongly support the application and use of a more precisely delimited Fusarium (= Gibberella) concept to accommodate taxa from the robust monophyletic node F3 on the basis of a well-defined and unique combination of morphological and biochemical features. This F3 node includes, among others, species of the F. fujikuroi, F. incarnatum-equiseti, F. oxysporum, and F. sambucinum species complexes, but not species of Bisifusarium [F. dimerum species complex (SC)], Cyanonectria (F. buxicola SC), Geejayessia (F. staphyleae SC), Neocosmospora (F. solani SC) or Rectifusarium (F. ventricosum SC). The present study represents the first step to generating a new online monograph of Fusarium and allied fusarioid genera (www.fusarium.org).

8.
Anim Genet ; 52(2): 155-170, 2021 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-33544919

RESUMO

ROHs are long stretches of DNA homozygous at each polymorphic position. The proportion of genome covered by ROHs and their length are indicators of the level and origin of inbreeding. Frequent common ROHs within the same population define ROH islands and indicate hotspots of selection. In this work, we investigated ROHs in a total of 1131 pigs from 20 European local pig breeds and in three cosmopolitan breeds, genotyped with the GGP Porcine HD Genomic Profiler. plink software was used to identify ROHs. Size classes and genomic inbreeding parameters were evaluated. ROH islands were defined by evaluating different thresholds of homozygous SNP frequency. A functional overview of breed-specific ROH islands was obtained via over-representation analyses of GO biological processes. Mora Romagnola and Turopolje breeds had the largest proportions of genome covered with ROH (~1003 and ~955 Mb respectively), whereas Nero Siciliano and Sarda breeds had the lowest proportions (~207 and 247 Mb respectively). The highest proportion of long ROH (>16 Mb) was in Apulo-Calabrese, Mora Romagnola and Casertana. The largest number of ROH islands was identified in the Italian Landrace (n = 32), Cinta Senese (n = 26) and Lithuanian White Old Type (n = 22) breeds. Several ROH islands were in regions encompassing genes known to affect morphological traits. Comparative ROH structure analysis among breeds indicated the similar genetic structure of local breeds across Europe. This study contributed to understanding of the genetic history of the investigated pig breeds and provided information to manage these pig genetic resources.


Assuntos
Endogamia , Sus scrofa/genética , Animais , Europa (Continente) , Genoma , Genótipo , Homozigoto , Polimorfismo de Nucleotídeo Único , Densidade Demográfica
9.
Int J Pharm ; 592: 120029, 2021 Jan 05.
Artigo em Inglês | MEDLINE | ID: mdl-33130218

RESUMO

The treatment with anticancer drugs remains a challenge, as available drugs still entail the risk of deleterious off-target effects. The present study describes folic acid conjugated nanostructured lipid carriers (NLCs) as an effective doxorubicin delivery approach targeted to breast cancer cells. Two distinct NLCs formulations were designed and optimized leading to an encapsulation efficiency over than 65%. Cytotoxic and targeting potential of NLCs were studied in vitro, using MDA-MB-231 cell line. Results showed an enhanced cellular uptake of conjugated NLCs. In vitro release studies, mimicking the path in the body after oral administration, show that all formulations would reach the tumor microenvironment bearing 50% of the encapsulated doxorubicin. Moreover, NLCs demonstrated storage stability at 25 °C for at least 42 days. Overall, results revealed that the developed NLCs enable the possibility of oral administration and are a promising approach for the targeted delivery of doxorubicin to breast cancer cells.


Assuntos
Antineoplásicos , Nanoestruturas , Doxorrubicina , Portadores de Fármacos , Sistemas de Liberação de Medicamentos , Lipídeos , Tamanho da Partícula
10.
Mycologia ; 112(6): 1138-1170, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33146584

RESUMO

Ophiocordyceps species infecting ants are globally distributed, with diversity concentrated in the tropics and decreasing with increasing latitude. Among these myrmecophilous species, the ones exhibiting the ability to manipulate host behavior, the so-called "zombie-ant fungi" of the O. unilateralis clade, have been studied progressively over the last decade. However, we know very little about other myrmecophilous groups, such as species within the Ophiocordyceps subgenus Neocordyceps. Species within this group exhibit Hymenostilbe asexual morphs with the ascospores readily breaking into part-spores and regularly kill their hosts on the forest floor, with few records of behavioral manipulation. Here, we describe five new species of Ophiocordyceps belonging to the subgenus Neocordyceps infecting ants in the rainforests of the Brazilian Amazon and Ghana and analyze their ability to manipulate host behavior. We also propose a new status for a species previously described as a variety, providing its phylogenetic placement for the first time. The species proposed herein can readily be separated using classic taxonomic criteria, and this is further supported by ecological and molecular multiloci data.


Assuntos
Formigas/microbiologia , Interações Hospedeiro-Patógeno , Hypocreales/classificação , Hypocreales/genética , Animais , Brasil , Gana , Hypocreales/isolamento & purificação , Masculino , Filogenia , Floresta Úmida , Especificidade da Espécie , Esporos Fúngicos
11.
Aquat Toxicol ; 227: 105595, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-32911330

RESUMO

In order to understand the potential impacts of nickel nanowires (Ni NWs) after reaching the aquatic environment, this research evaluated the toxicity of Ni NWs with different lengths (≤ 1.1, ≤11 and ≤ 80 µm) for several floating, planktonic and nektonic freshwater organisms. In this work, Ni NWs were synthesized by electrodeposition using anodized aluminum oxide (AAO) membranes. The toxicity of the NWs was assessed using a battery of aquatic species representative of key functions at the ecosystem level: the bacterium Aliivibrio fischeri, the algae Raphidocelis subcapitata, the macrophyte Lemna minor, the crustacean Daphnia magna and the zebrafish Danio rerio. Results indicated that for the concentrations tested (up to 2.5 mg L-1) the synthesized Ni NWs showed low toxicity. And although no lethal toxicity was observed for D. magna, at a sublethal level the feeding activity of the freshwater cladoceran was severely affected after exposure to Ni NWs. These findings showed that NWs can be accumulated in the gut of D. magna, even during a short exposure (24 h) directly impairing Daphnia nutrition and eventually populations growth. Consequently, this can also contribute to trophic transfer of NWs along the food chain. According to our results the toxicity of Ni NW may be mainly attributed to physical effects rather than chemical effects of Ni ions, considering that the concentrations of Ni NWs tested in this study were well below the toxicity thresholds reported in the literature for Ni ions and for Ni NMs.


Assuntos
Organismos Aquáticos/efeitos dos fármacos , Nanofios/toxicidade , Níquel/toxicidade , Purificação da Água/métodos , Aliivibrio fischeri , Animais , Clorofíceas , Daphnia/efeitos dos fármacos , Ecossistema , Cadeia Alimentar , Água Doce , Eliminação de Resíduos Líquidos/métodos , Poluentes Químicos da Água/toxicidade , Peixe-Zebra
12.
Arq. bras. med. vet. zootec. (Online) ; 72(5): 1845-1860, Sept.-Oct. 2020. tab, mapas
Artigo em Português | LILACS, VETINDEX | ID: biblio-1131546

RESUMO

Diferentes tipos de queijos artesanais são produzidos, comercializados e consumidos no Brasil, o que impulsiona o constante desenvolvimento de normas por órgãos oficiais, como o Mapa. A criação do Suasa e do Sisbi-POA foi fundamental para esse setor, por permitir um sistema de equivalência na fiscalização e por ampliar a distribuição. Ainda, o Mapa passou a permitir que queijos artesanais produzidos com leite cru pudessem ser maturados em um período inferior a 60 dias, desde que comprovada sua inocuidade. A redução do tempo de maturação é um tema controverso e polêmico, já que não há critérios específicos que estudos científicos devem contemplar, o que permite múltiplas interpretações de dados. Com a criação e a regulamentação do selo Arte, a fiscalização dos produtos artesanais foi designada aos órgãos de agricultura, pecuária e de saúde pública, em complementação à atribuição já prevista pelo Mapa e pelo Sisbi-POA. Ainda, o selo Arte atribui aos órgãos de inspeção uma função orientadora, atividade que deveria ser prioritariamente executada por agências de extensão e associações. As normas que balizam a produção e comercialização de produtos artesanais devem ser frequentemente atualizadas, devido aos constantes avanços científicos na área e para assegurar a oferta de produtos com qualidade e inócuos aos consumidores.(AU)


Different artisanal cheeses are produced, commercialized and consumed in Brazil, leading to a constant development of related rules by the MAPA and other official agencies. The establishment of two national programs (SUASA and SISBI-POA) allowed an equivalence in inspection system and an expanded distribution. Also, MAPA allowed ripening time lower than 60 days for artisanal raw milk cheeses, based on scientific studies that assure their safety. However, lowering the ripening period is still controversial, once there are no proper established criteria for such scientific studies, leading to potential multiple interpretation of data. The newly established ARTE certification transferred the inspection responsibilities of artisanal products to secretaries of agriculture, livestock and health, in support of what was already predicated by MAPA and SISBI-POA. Based on ARTE certification, the inspection service must also provide orientation guidance to producers, which should be done specifically by extension organs and associations. The norms that guide the production and commercialization of these artisanal products often need to be updated, but based on well-established methodologies and procedures, to ensure the distribution of suitable products to consumers.(AU)


Assuntos
Queijo/normas , Laticínios/normas , Padrão de Identidade e Qualidade para Produtos e Serviços , Alimentos de Origem Animal , Legislação sobre Alimentos/história , Brasil
13.
Vet J ; 262: 105473, 2020 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-32792091

RESUMO

This study aimed to evaluate the effects of chronic subclinical mastitis (CSM) on milk production and component yields in dairy cows. A total of six herds located in the Midwest area of São Paulo State, Brazil were selected. Herds were visited once every 2 weeks to measure milk yield and to collect milk samples from lactating Holstein cows. Milk samples were collected at two stages (1 and 2), and each stage comprised three milk samplings. In stage 1, a total of 117 of 647 cows were diagnosed with CSM based on at least two of three repeated somatic cell counts (SCC) > 2000,000 cells/mL and positive bacterial milk culture results (BC). Cows with CSM were selected for the second stage. In stage 2, selected cows had quarter sampling aseptically collected for BC analyses prior to milking, and quarter milk yield was measured. Milk components (total protein, fat, lactose, and total solids) were measured using mid-infrared spectroscopy. Mammary quarters were considered healthy if all three repeated SCC results were ≤ 200,000 cells/mL and no bacterial growth was detected on BC. All quarters with positive bacterial growth were classified as having (non-chronic) subclinical mastitis when only one of three SCC results were > 200,000 cells/mL, and CSM when at least two of three SCC results were > 200,000 cells/mL. The effects of CSM by type of pathogen on milk and components yield were assessed using a linear mixed model. Mammary quarters with CSM caused by major pathogens had milk loss of 1.1 kg/quarter milking in comparison to healthy quarters. Milk losses were 0.8 and 1.3 kg/quarter milking when CSM was caused by Staphylococcus aureus or environmental streptococci, respectively. In addition, healthy quarters produced more milk components than quarters with CSM caused by major pathogens. Minor pathogens causing CSM (non-aureus staphylococci and Corynebacterium spp.) had no effect on milk yield. Quarters with CSM had lower milk and component yields when compared with healthy quarters. Milk losses varied according to the type of pathogen and were higher when associated with major pathogens such as S. aureus and environmental streptococci compared with healthy quarters.


Assuntos
Mastite Bovina/fisiopatologia , Leite/química , Leite/metabolismo , Infecções Estafilocócicas/veterinária , Infecções Estreptocócicas/veterinária , Animais , Infecções Assintomáticas , Brasil , Bovinos , Doença Crônica/veterinária , Mastite Bovina/microbiologia , Leite/microbiologia , Infecções Estafilocócicas/microbiologia , Infecções Estafilocócicas/fisiopatologia , Staphylococcus aureus/fisiologia , Infecções Estreptocócicas/microbiologia , Infecções Estreptocócicas/fisiopatologia , Streptococcus/fisiologia
14.
Anim Genet ; 51(4): 541-556, 2020 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-32510676

RESUMO

In this study, we identified copy number variants (CNVs) in 19 European autochthonous pig breeds and in two commercial breeds (Italian Large White and Italian Duroc) that represent important genetic resources for this species. The genome of 725 pigs was sequenced using a breed-specific DNA pooling approach (30-35 animals per pool) obtaining an average depth per pool of 42×. This approach maximised CNV discovery as well as the related copy number states characterising, on average, the analysed breeds. By mining more than 17.5 billion reads, we identified a total of 9592 CNVs (~683 CNVs per breed) and 3710 CNV regions (CNVRs; 1.15% of the reference pig genome), with an average of 77 CNVRs per breed that were considered as private. A few CNVRs were analysed in more detail, together with other information derived from sequencing data. For example, the CNVR encompassing the KIT gene was associated with coat colour phenotypes in the analysed breeds, confirming the role of the multiple copies in determining breed-specific coat colours. The CNVR covering the MSRB3 gene was associated with ear size in most breeds. The CNVRs affecting the ELOVL6 and ZNF622 genes were private features observed in the Lithuanian Indigenous Wattle and in the Turopolje pig breeds respectively. Overall, the genome variability unravelled here can explain part of the genetic diversity among breeds and might contribute to explain their origin, history and adaptation to a variety of production systems.


Assuntos
Variações do Número de Cópias de DNA , DNA/genética , Sus scrofa/genética , Animais , Cruzamento , Feminino , Itália , Masculino , Fenótipo , Especificidade da Espécie , Sequenciamento Completo do Genoma/veterinária
15.
Braz. j. biol ; 80(2): 273-284, Apr.-June 2020. tab, graf
Artigo em Inglês | LILACS | ID: biblio-1132386

RESUMO

Abstract The production of litterfall is essential for nutrient cycling in terrestrial ecosystems. From November 2009 to October 2011, analyzed the monthly litterfall production in two areas of Caatinga, a type of Seasonally Dry Tropical Forest located in the Cariri Paraibano, in the semiarid region of the Paraíba, Northeastern Brazil. One of the areas, Private Natural Heritage Reserve (RPPN) Fazenda Almas, is legally protected, and the other, Fazenda Moreiras, does not. The aims were to evaluate the effects of precipitation, evapotranspiration and vegetation structure on the temporal and spatial dynamics of litterfall production. Eight sampling points were randomly chosen at each site, and two 1 m2 collectors were installed 50 m apart from each other. The collected material was sorted, dried and weighed. Additionally, the characteristics (density, species richness, height and mean basal area) of the tree-shrub stratum in plots with a 10 m radius surrounding each collector. Total litterfall production was 4,500 kg ha-1 yr-1 for Fazenda Almas and 3,300 kg ha-1 yr-1 for Fazenda Moreiras; these values were within the expected range for Seasonally Dry Tropical Forests. The inter- and intra-annual variation in litterfall production was positively correlated with precipitation and evapotranspiration rates, and four months after the highest precipitation rates, there was a marked decrease in litterfall occurred during the dry season. Furthermore, the contributions of the material fractions were distinct with the leaf fraction representing for more than 60% of the litterfall, and the vegetation structure explained 75% of the variation in litterfall production. Therefore, climatic factors and vegetation structure affect the temporal and spatial dynamics of litterfall production and consequently influence nutrient dynamics in the semiarid region of Brazil.


Resumo A produção de serapilheira é essencial para a ciclagem de nutrientes em ecossistemas terrestres. De Novembro de 2009 a Outubro de 2011, foi analisada a produção de serapilheira em duas áreas de Caatinga, um tipo de Floresta Tropical sazonalmente Seca localizada no Cariri Paraibano, na região do semiárido da Paraíba, Nordeste do Brasil. Uma das áreas, Reserva Particular do Patrimônio Natural - RPPN - Fazenda Almas, é legalmente protegida, ao contrário da outra, Fazenda Moreiras. Os objetivos foram avaliar o efeito da precipitação, evapotranspiração e estrutura da vegetação sobre a dinâmica temporal e espacial da produção de serapilheira. Oito pontos de amostragem foram escolhidos aleatoriamente em cada localidade, e dois coletores de 1 m2 foram instalados a 50 m um do outro. O material coletado foi triado, secado e pesado. Adicionalmente, foram registradas as características (densidade, riqueza de espécies, altura e área basal média) das espécies arbóreo-arbustivas na parcela com um raio (r) de 10 m ao redor de cada coletor. A produção total de serapilheira foi 4,500 Kg ha-1 yr-1 para a Fazenda Almas e 3,300 kg ha-1 yr-1 para a Fazenda Moreiras; estes valores estão dentro da faixa esperada para as Florestas Tropicais sazonalmente secas. A variação inter e intranual na produção de serapilheira foi positivamente correlacionada com as taxas de precipitação e evapotranspiração, e quatro meses depois das maiores taxas de precipitação, houve uma diminuição acentuada na serapilheira coletada durante a estação seca. Além disso, as contribuições das frações de material foram distintas com a fração de folha representando mais que 60% da serapilheira, e a estrutura da vegetação explicou 75% da variação na produção de serapilheira. Portanto, os fatores climáticos e a estrutura da vegetação afetam a dinâmica temporal e espacial da produção de serapilheira e, consequentemente, influenciam a dinâmica de nutrientes na região semiárida do Brasil.


Assuntos
Florestas , Ecossistema , Estações do Ano , Árvores , Clima Tropical , Brasil
16.
Sci Rep ; 10(1): 4686, 2020 Mar 13.
Artigo em Inglês | MEDLINE | ID: mdl-32170112

RESUMO

Rare-earth orthochromites with distorted perovskite structure (e.g. RCrO3, R = Sm, Gd) have been under strong debate with respect to the origin of their ferroelectric order. Of particular interest is the question of whether such orthochromites are, in fact, magnetically driven improper ferroelectrics, as many rare-earth manganites or orthoferrites. Here we show, by studying at the atomic scale the rare-earth SmCrO3 system that a distortion of the Sm local environment emerges within the paramagnetic phase, near room temperature. Our Electric Field Gradient measurements combined with first-principles calculations show that the emergent phase cannot be simply ascribed to the Pna21 structure as reported for GdCrO3 or SmCrO3. Instead a local inhomogeneous state, where regular non-polar and polar distorted environments coexist, develops at low temperatures.

17.
Materials (Basel) ; 13(4)2020 Feb 11.
Artigo em Inglês | MEDLINE | ID: mdl-32054053

RESUMO

Multifunctional nanosystems combining magnetic and plasmonic properties are a promising approach for cancer therapy, allowing magnetic guidance and a local temperature increase. This capability can provide a triggered drug release and synergistic cytotoxic effect in cancer cells. In this work, nickel ferrite/gold nanoparticles were developed, including nickel ferrite magnetic nanoparticles decorated with plasmonic gold nanoparticles and core/shell nanostructures (with a nickel ferrite core and a gold shell). These nanoparticles were covered with a surfactant/lipid bilayer, originating liposome-like structures with diameters below 160 nm. The heating capacity of these systems, upon excitation with light above 600 nm wavelength, was assessed through the emission quenching of rhodamine B located in the lipid layer. The developed nanosystems show promising results for future applications in thermotherapy.

18.
J Phys Condens Matter ; 32(26): 265401, 2020 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-32097897

RESUMO

A multi-functional Gd5Si1.3Ge2.7 thin film deposited by pulsed laser ablation in the form of an ensemble of nanoparticles was studied for 18 thermal cycles via electron transport measurements together with structural and magnetic characterization. A general negative thermal dependency of the resistivity (ρ) is observed, which contrasts with the metallic-like behavior observed in bulk Gd5Si x Ge4-x compounds. This general trend is interrupted by a two-step, positive-slope transition in ρ(T) throughout the [150, 250] K interval, corresponding to two consecutive magnetic transitions: a fully coupled magnetostructural followed by a magnetic order on heating. An avalanche-like behavior is unveiled by the ∂ρ/∂T(T) curves and is explained based on the severe strains induced cyclically by the magnetostructural transition, leading to a cycling evolution of the transition onset temperature ([Formula: see text]/∂n ∼ 1.6 K/cycle, n being the number of cycles). Such behavior is equivalent to the action of a pressure of 0.56 kBar being formed and building up at every thermal cycle due to the large volume induced change across the magnetostructural transition. Moreover the thermal hysteresis, detected in both ρ and magnetization versus temperature curves, evolves significantly along the cycles, decreasing as n increases. This picture corroborates the thermal activation energy enhancement-estimated via an exponential fitting of the ∂ρ/∂T(T) in the avalanche regime. This work demonstrates the importance of using a short-range order technique, to probe both magnetic and magnetostructural transitions and their evolution with thermal cycles.

19.
Braz J Biol ; 80(2): 273-284, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-31389481

RESUMO

The production of litterfall is essential for nutrient cycling in terrestrial ecosystems. From November 2009 to October 2011, analyzed the monthly litterfall production in two areas of Caatinga, a type of Seasonally Dry Tropical Forest located in the Cariri Paraibano, in the semiarid region of the Paraíba, Northeastern Brazil. One of the areas, Private Natural Heritage Reserve (RPPN) Fazenda Almas, is legally protected, and the other, Fazenda Moreiras, does not. The aims were to evaluate the effects of precipitation, evapotranspiration and vegetation structure on the temporal and spatial dynamics of litterfall production. Eight sampling points were randomly chosen at each site, and two 1 m2 collectors were installed 50 m apart from each other. The collected material was sorted, dried and weighed. Additionally, the characteristics (density, species richness, height and mean basal area) of the tree-shrub stratum in plots with a 10 m radius surrounding each collector. Total litterfall production was 4,500 kg ha-1 yr-1 for Fazenda Almas and 3,300 kg ha-1 yr-1 for Fazenda Moreiras; these values were within the expected range for Seasonally Dry Tropical Forests. The inter- and intra-annual variation in litterfall production was positively correlated with precipitation and evapotranspiration rates, and four months after the highest precipitation rates, there was a marked decrease in litterfall occurred during the dry season. Furthermore, the contributions of the material fractions were distinct with the leaf fraction representing for more than 60% of the litterfall, and the vegetation structure explained 75% of the variation in litterfall production. Therefore, climatic factors and vegetation structure affect the temporal and spatial dynamics of litterfall production and consequently influence nutrient dynamics in the semiarid region of Brazil.


Assuntos
Ecossistema , Florestas , Brasil , Estações do Ano , Árvores , Clima Tropical
20.
Sci Rep ; 9(1): 18308, 2019 Dec 04.
Artigo em Inglês | MEDLINE | ID: mdl-31797952

RESUMO

The coupling between electric, magnetic and elastic features in multiferroic materials is an emerging field in materials science, with important applications on alternative solid-state cooling technologies, energy harvesting and sensors/actuators. In this direction, we developed a thorough investigation of a multiferroic composite, comprising magnetocaloric/magnetostrictive Gd[Formula: see text]Si[Formula: see text]Ge[Formula: see text] microparticles blended into a piezo- and pyroelectric poly(vinylidene) fluoride (PVDF) matrix. Using a simple solvent casting technique, the formation and stabilization of PVDF electroactive phases are improved when the filler content increases from 2 to 12 weight fraction (wt.%). This effect greatly contributes to the magnetoelectric (ME) coupling, with the ME coefficient [Formula: see text] increasing from 0.3 V/cm.Oe to 2.2 V/cm.Oe, by increasing the amount of magnetic material. In addition, magnetic measurements revealed that the ME-coupling has influenced the magnetocaloric effect via a contribution from the electroactive polymer and hence leading to a multicaloric effect. These results contribute to the development of multifunctional systems for novel technologies.

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